If a document is open and contains sequences (whether they have been aligned or not) and nothing is selected, the Details panel contains the following information:
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- The project filename.
- Sequence type – DNA, RNA, or Protein.
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Alignment
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This section is only displayed for, and only pertains to, sequences in the project that have already been aligned.
- Alignment – Alignment algorithm used (e.g., MAFFT, MUSCLE).
- Sequences – Number of sequences in the alignment.
- Sequence type – DNA or protein.
- Min. and Max. sequence lengths – Lengths of the shortest and longest sequences in the alignment.
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Unaligned Sequences
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This section is only displayed for, and only pertains to, sequences in the project that are not included in the alignment.
- Sequences – Number of unaligned sequences.
- Sequence type – DNA, RNA, or Protein.
- Min. and Max. sequence lengths – Lengths of the shortest and longest unaligned sequences.
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Actions
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- Add sequences – Shortcut to File > Add Sequences (see Add ungapped / gapped sequences to a project).
- Add sequences end-to-end – Shortcut to File > Add Sequences End-to-end (See Add multi-segment sequences to a project).
- Align with options – Shortcut to Align > Align with Options.
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